I'm sure there's pork (it's a Congressional bill), but so far the only thing I've seen that's genuinely objectionable (at least in the context of the bill) is spending $2M to repair a room in the Smithsonian, and $4M for Kennedy Space Center.
The fisheries stuff was pulled from the bill long before this point, apparently.
What's left of what is being called "pork" is primarily:
- money going to repair and re-fit Amtrak and NJTransit (which is used a ton by people in NY and NJ)
- replenishing FEMA's disaster-relief budget that has been mostly spent by Sandy operations
- funding for Manhattan's VA Medical Center
- upping the Army Corps of Engineer's annual budget in light of everything spent to get them to, and operating in, the area
- re-building non-infrastructural environmental damage caused by Sandy